------- SECIS element -- id:1 -- grade:A ---- Chromosome = CM007941.1:subseq_67247738,123138_ Strand = + Positions = 73530 - 73612 Found by: Infernal (score=27.55) Covels (score=23.65) Stem2 length = 10 Apical loop length = 19 Insertion in stem2 = 0, 0 Free Energy = -16.7 ..(((((((............(((((((((((((((.................)))))))))))))))........))))))).. model uucggucaugcg-----UuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ...(((((((...........{[[{(([(((((((...................)))))))]))}]]}..--...)))))))... target UAGGGAUGGGUGAGUGCUGUUUGACGUGCUGGCCCUUAACCCAAUCACUGUGGUGGGCUAGAACUGAUGU--CCCUCUGUCCAAA **** ^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = CM007941.1:subseq_67247738,123138_ Strand = + Positions = 51067 - 51153 Found by: Infernal (score=11.48) Covels (score=0.12) Stem2 length = 11 Apical loop length = 25 Insertion in stem2 = 0, 0 Free Energy = -5.41 ..(((((((........(((((((((((((((...........................)))))))))))))))........))))))).. model uucggucaugcg-UuaAUGAcGgccuggcccuAAAcCcuuuuugggg------------cgggccaggcCuGAUGuuuuuucaugaccggc ..(({((((........([[[((([({((((((.........................))))))})])))]]])----....))))})).. target UAGGCUAUGCAGUUGCAUGAAGACAUCGUUUUGAUCCCUGGAACAGGGUUGGGACCCCUGGAACAGGGUUGGAG----AGCCCAUAACCAA **** ^^ ****